Cyclic nucleotide turnover

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Cyclic nucleotides are second messengers generated by cyclase enzymes from precursor triphosphates and hydrolysed by phosphodiesterases. The cellular actions of these cyclic nucleotides are mediated through activation of protein kinases (cAMP- and cGMP-dependent protein kinases), ion channels (cyclic nucleotide-gated, CNG, and hyperpolarization and cyclic nucleotide-gated, HCN) and guanine nucleotide exchange factors (GEFs, Epac).


Adenylyl cyclases


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Adenylyl cyclase (ENSF00000000188), E.C. 4.6.1.1, converts ATP to cAMP and diphosphate. Mammalian membrane-bound adenylyl cyclases are typically made up of two clusters of six TM domains separating two intracellular, overlapping catalytic domains that are the target for the nonselective activators forskolin, NKH477 (except AC9, [39]) and Gαs (the stimulatory G protein α subunit). adenosine and its derivatives (e.g. 2',5'-dideoxyadenosine), acting through the P-site, appear to be physiological inhibitors of adenylyl cyclase activity [51]. Three families of adenylyl cyclase are distinguishable: calmodulin-stimulated (AC1, AC3 and AC8), Ca2+-inhibitable (AC5 and AC6) and Ca2+-insensitive (AC2, AC4 and AC7) forms.


Unless otherwise stated all data refer to the human proteins. Gene information is provided for human (Hs), mouse (Mm) and rat (Rn).

Enzymes

AC1 Show »

AC2 Show »

AC3 Show »

AC4 Show »

AC5 Show »

AC6 Show »

AC7 Show »

AC8 Show »

AC9 Show »


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Soluble guanylyl cyclase


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Soluble guanylyl cyclase (GTP diphosphate-lyase (cyclising)), E.C. 4.6.1.2, is a heterodimer comprising α and β chains, both of which have two subtypes in man (predominantly α1β1; [58]). A haem group is associated with the β chain and is the target for the endogenous ligand NO (NO•), and, potentially, carbon monoxide [16]. The enzyme converts guanosine-5'-triphosphate (GTP) to the intracellular second messenger 3',5'-guanosine monophosphate (cGMP).


Unless otherwise stated all data refer to the human proteins. Gene information is provided for human (Hs), mouse (Mm) and rat (Rn).

Enzymes

Soluble guanylyl cyclase Show »

Subunits

Soluble guanylyl cyclase α 1 subunit Show »

Soluble guanylyl cyclase α 2 subunit Show »

Soluble guanylyl cyclase β 1 subunit Show »

Soluble guanylyl cyclase β 2 subunit Show »


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Exchange protein activated by cyclic AMP (Epac)


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Epacs are members of a family of guanine nucleotide exchange factors (ENSFM00250000000899), which also includes RapGEF5 (GFR, KIAA0277, MR-GEF, ENSG00000136237) and RapGEFL1 (Link-GEFII, ENSG00000108352). They are activated endogenously by cAMP and with some pharmacological selectivity by 8-pCPT-2'-O-Me-cAMP [10]. Once activated, Epacs induce an enhanced activity of the monomeric G proteins, Rap1 and Rap2 by facilitating binding of GTP in place of GDP, leading to activation of phospholipase C [42].


Unless otherwise stated all data refer to the human proteins. Gene information is provided for human (Hs), mouse (Mm) and rat (Rn).

Enzymes

Epac1 Show »

Epac2 Show »


Phosphodiesterases, 3',5'-cyclic nucleotide


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3',5'-Cyclic nucleotide phosphodiesterases (PDEs, 3',5'-cyclic-nucleotide 5'-nucleotidohydrolase), E.C. 3.1.4.17, catalyse the hydrolysis of a 3',5'-cyclic nucleotide (usually cAMP or cGMP). IBMX is a nonselective inhibitor with an IC50 value in the millimolar range for all isoforms except PDE 8A, 8B and 9A. A 2',3'-cyclic nucleotide 3'-phosphodiesterase (E.C. 3.1.4.37 CNPase) activity is associated with myelin formation in the development of the CNS.


Unless otherwise stated all data refer to the human proteins. Gene information is provided for human (Hs), mouse (Mm) and rat (Rn).

Enzymes

PDE1A Show »

PDE1B Show »

PDE1C Show »

PDE2A Show »

PDE3A Show »

PDE3B Show »

PDE4A Show »

PDE4B Show »

PDE4C Show »

PDE4D Show »

PDE5A Show »

PDE7A Show »

PDE7B Show »

PDE8A Show »

PDE8B Show »

PDE9A Show »

PDE10A Show »

PDE11A Show »

PDE6A Show »

PDE6B Show »

PDE6C Show »

PDE6D Show »

PDE6G Show »

PDE6H Show »


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