DAPI

Ligand id: 5498

Name: DAPI

Structure and Physico-chemical Properties

2D Structure
Calculated Physico-chemical Properties
Hydrogen bond acceptors 5
Hydrogen bond donors 5
Rotatable bonds 3
Topological polar surface area 115.53
Molecular weight 277.13
XLogP 3.05
No. Lipinski's rules broken 0

Molecular properties generated using the CDK

Classification
Compound class Synthetic organic
IUPAC Name
2-(4-carbamimidoylphenyl)-1H-indole-6-carboximidamide
Synonyms
4',6-diamidino-2-phenylindole | antifade
Database Links
CAS Registry No. 47165-04-8
ChEBI CHEBI:51231
ChEMBL Ligand CHEMBL48217
PubChem CID 2954
RCSB PDB Ligand DAP
Search Google for chemical match using the InChIKey FWBHETKCLVMNFS-UHFFFAOYSA-N
Search Google for chemicals with the same backbone FWBHETKCLVMNFS
Search UniChem for chemical match using the InChIKey FWBHETKCLVMNFS-UHFFFAOYSA-N
Search UniChem for chemicals with the same backbone FWBHETKCLVMNFS
Wikipedia DAPI
Comments
DAPI is a widely used fluorescence microscopy tool. It fluorescently labels A-T rich regions in DNA in live and fixed cells.