<i>GPR176</i> | Class A Orphans | IUPHAR/BPS Guide to PHARMACOLOGY

GPR176

Target id: 637

Nomenclature: GPR176

Family: Class A Orphans

Annotation status:  image of a green circle Annotated and expert reviewed. Please contact us if you can help with updates.  » Email us

   GtoImmuPdb view: OFF :     Currently no data for GPR176 in GtoImmuPdb

Gene and Protein Information
class A G protein-coupled receptor
Species TM AA Chromosomal Location Gene Symbol Gene Name Reference
Human 7 515 15q14-q15.1 GPR176 G protein-coupled receptor 176 1
Mouse 7 515 2 Gpr176 G protein-coupled receptor 176
Rat 7 513 3 Gpr176 G protein-coupled receptor 176
Previous and Unofficial Names
HB954 | G-protein coupled receptor AGR9 | RBU-15
Database Links
Specialist databases
GPCRDB gp176_human (Hs), gp176_mouse (Mm), gp176_rat (Rn)
Other databases
Ensembl Gene
Entrez Gene
Human Protein Atlas
KEGG Gene
OMIM
RefSeq Nucleotide
RefSeq Protein
UniProtKB
Wikipedia
Tissue Distribution
Brain, spleen, lung, kidney, intestine, cultured rat aortic smooth muscle
Species:  Rat
Technique:  Northern blot
References:  1-2
Tissue Distribution Comments
Highest levels of expression are seen in human ovary, embryonic and nerve tissues (based on Unigene EST profile).
Expression Datasets

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Log average relative transcript abundance in mouse tissues measured by qPCR from Regard, J.B., Sato, I.T., and Coughlin, S.R. (2008). Anatomical profiling of G protein-coupled receptor expression. Cell, 135(3): 561-71. [PMID:18984166] [Raw data: website]

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Biologically Significant Variants
Type:  Single nucleotide polymorphism
Species:  Human
Amino acid change:  K77R
Global MAF (%):  1
Subpopulation MAF (%):  AFR|AMR|ASN|EUR: 14|6|17|3
Minor allele count:  C=0.099/216
SNP accession: 
Validation:  1000 Genomes, Frequency
Biologically Significant Variant Comments
The RefSeq gene (Gene ID:11245) has 3 coding exons, first contains most of TM 1, second contains most of TMs 2 and 3. There are a number of cDNAs which insert an extra 58 base exon between exons 1 and 2 and then use a compensating shorter (by 61 bases at acceptor end) version of exon 2. These alternate splice variants seem to be associated with one allele of the SNP rs66490630 which is the last base of the extra exon.

References

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1. Hata S, Emi Y, Iyanagi T, Osumi T. (1995) cDNA cloning of a putative G protein-coupled receptor from brain. Biochim. Biophys. Acta, 1261 (1): 121-5. [PMID:7893747]

2. Ishizaka N, Okazaki H, Kurokawa K, Kumada M, Takuwa Y. (1994) Molecular cloning of a novel putative G protein-coupled receptor from rat aortic smooth muscle. Downregulation of the mRNA level by the cyclic AMP messenger pathway. Biochim. Biophys. Acta, 1218 (2): 173-80. [PMID:8018717]

Contributors

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How to cite this page

Anthony P. Davenport, Stephen Alexander, Joanna L. Sharman, Adam J. Pawson, Helen E. Benson, Amy E. Monaghan, Wen Chiy Liew, Chido Mpamhanga, Jim Battey, Richard V. Benya, Robert T. Jensen, Sadashiva Karnik, Evi Kostenis, Eliot Spindel, Laura Storjohann, Kalyan Tirupula, Tom I. Bonner, Richard Neubig, Jean-Philippe Pin, Michael Spedding, Anthony Harmar.
Class A Orphans: GPR176. Last modified on 16/06/2015. Accessed on 18/11/2018. IUPHAR/BPS Guide to PHARMACOLOGY, http://www.guidetopharmacology.org/GRAC/ObjectDisplayForward?objectId=637.