neurokinin B   Click here for help

GtoPdb Ligand ID: 2090

Synonyms: neurokinin β | neuromedin K
Compound class: Endogenous peptide in human, mouse or rat
Species: Human, Mouse, Rat, Pig
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Ligand Activity Visualisation Charts

These are box plot that provide a unique visualisation, summarising all the activity data for a ligand taken from ChEMBL and GtoPdb across multiple targets and species. Click on a plot to see the median, interquartile range, low and high data points. A value of zero indicates that no data are available. A separate chart is created for each target, and where possible the algorithm tries to merge ChEMBL and GtoPdb targets by matching them on name and UniProt accession, for each available species. However, please note that inconsistency in naming of targets may lead to data for the same target being reported across multiple charts.

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View interactive charts of activity data across species

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2D Structure
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2D Structure

An image of the ligand's 2D structure. For small molecules with SMILES these are drawn using the NCI/CADD Chemical Identifier Resolver. Click on the image to access the chemical structure search tool with the ligand pre-loaded in the structure editor. For other types of ligands, e.g. longer nucleotides and peptides, a manually drawn representation of the molecule may be provided.

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SMILES / InChI / InChIKey
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SMILES / InChI / InChIKey

SMILES (Simplified Molecular Input Line Entry Specification) A specification for unambiguously describing the structure of chemical molecules using short ASCII strings. Canonical SMILES specify a unique representation of the 2D structure without chiral or isotopic specifications. Isomeric SMILES include chiral specification and isotopes.

Standard InChI (IUPAC International Chemical Identifier) and InChIKey InChI is a non-proprietary, standard, textual identifier for chemical substances designed to facilitate linking of information and database searching. An InChIKey is a simplified version of a full InChI, designed for easier web searching.

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Canonical SMILES CSCCC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NCC(=O)NC(C(=O)NC(C(=O)N)CCSC)CC(C)C)C(C)C)Cc1ccccc1)Cc1ccccc1)CC(=O)O)Cc1[nH]cnc1)NC(=O)C(CC(=O)O)N
Isomeric SMILES CSCC[C@@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)NCC(=O)N[C@H](C(=O)N[C@H](C(=O)N)CCSC)CC(C)C)C(C)C)Cc1ccccc1)Cc1ccccc1)CC(=O)O)Cc1[nH]cnc1)NC(=O)[C@H](CC(=O)O)N
InChI InChI=1S/C55H79N13O14S2/c1-30(2)21-38(50(77)62-36(47(57)74)17-19-83-5)61-43(69)28-59-55(82)46(31(3)4)68-54(81)40(23-33-15-11-8-12-16-33)65-51(78)39(22-32-13-9-7-10-14-32)64-53(80)42(26-45(72)73)67-52(79)41(24-34-27-58-29-60-34)66-49(76)37(18-20-84-6)63-48(75)35(56)25-44(70)71/h7-16,27,29-31,35-42,46H,17-26,28,56H2,1-6H3,(H2,57,74)(H,58,60)(H,59,82)(H,61,69)(H,62,77)(H,63,75)(H,64,80)(H,65,78)(H,66,76)(H,67,79)(H,68,81)(H,70,71)(H,72,73)/t35-,36-,37-,38-,39-,40-,41-,42-,46-/m0/s1
InChI Key NHXYSAFTNPANFK-HDMCBQFHSA-N
Classification Click here for help
Compound class Endogenous peptide in human, mouse or rat
Ligand families/groups Neuropeptides
IUPAC Name Click here for help
(3S)-3-[[(2S)-2-[[(2S)-2-[[(2S)-2-amino-4-hydroxy-4-oxobutanoyl]amino]-4-methylsulfanylbutanoyl]amino]-3-(3H-imidazol-4-yl)propanoyl]amino]-4-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[2-[[(2S)-1-[[(2S)-1-amino-4-methylsulfanyl-1-oxobutan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-2-oxoethyl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-4-oxobutanoic acid
Synonyms Click here for help
neurokinin β | neuromedin K
Gene/Precursor Click here for help
Gene symbol Gene name Species Precursor protein name Synonyms
TAC3 tachykinin precursor 3 Human preprotachykinin-B neurokinin beta, neuromedin K, NKB, NKNB, tachykinin 3, ZNEUROK1
Tac2 tachykinin 2 Mouse preprotachykinin-B neurokinin 2, neurokinin A, neurokinin alpha, neuromedin L, neuropeptide K, substance K
Tac3 tachykinin precursor 3 Rat preprotachykinin-B neurokinin B, Tac2, Tac3, tachykinin 2, tachykinin 3, tachykinin-3
TAC3 Pig prepro-neurokinin B -
Database Links Click here for help
Specialist databases
GPCRdb Ligand neurokinin B
Other databases
BindingDB Ligand 50079412
CAS Registry No. 86933-75-7
ChEMBL Ligand CHEMBL437797
Ensembl Gene ENSSSCG00000000418 (Pig), ENSMUSG00000025400 (Mm), ENSG00000166863 (Hs)
GtoPdb PubChem SID 135651811
Human Protein Atlas ENSG00000166863 (Hs)
PubChem CID 5311312
Search Google for chemical match using the InChIKey NHXYSAFTNPANFK-HDMCBQFHSA-N
Search Google for chemicals with the same backbone NHXYSAFTNPANFK
UniChem Compound Search for chemical match using the InChIKey NHXYSAFTNPANFK-HDMCBQFHSA-N
UniChem Connectivity Search for chemical match using the InChIKey NHXYSAFTNPANFK-HDMCBQFHSA-N
UniProtKB P67934 (Pig), P08435 (Rn), P55099 (Mm), Q9UHF0 (Hs)
Wikipedia Neurokinin_B

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Tocris
Neurokinin B (human, porcine) (links to external site)
Cat. No. 1582