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RFRP-2   Click here for help

GtoPdb Ligand ID: 5373

Synonyms: neuropeptide RFRP-2
Compound class: Endogenous peptide in human, mouse or rat
Comment: This sequence is predicted by similarity to other species
Species: Human
2D Structure
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2D Structure

An image of the ligand's 2D structure. For small molecules with SMILES these are drawn using the NCI/CADD Chemical Identifier Resolver. Click on the image to access the chemical structure search tool with the ligand pre-loaded in the structure editor. For other types of ligands, e.g. longer nucleotides and peptides, a manually drawn representation of the molecule may be provided.

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SMILES / InChI / InChIKey
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SMILES / InChI / InChIKey

SMILES (Simplified Molecular Input Line Entry Specification) A specification for unambiguously describing the structure of chemical molecules using short ASCII strings. Canonical SMILES specify a unique representation of the 2D structure without chiral or isotopic specifications. Isomeric SMILES include chiral specification and isotopes.

Standard InChI (IUPAC International Chemical Identifier) and InChIKey InChI is a non-proprietary, standard, textual identifier for chemical substances designed to facilitate linking of information and database searching. An InChIKey is a simplified version of a full InChI, designed for easier web searching.

Generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/)

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Canonical SMILES OCC(C(=O)NC(C(=O)NCC(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)N1CCCC1C(=O)NC(C(=O)NC(C(=O)NC(C(=O)O)CO)CCCN=C(N)N)CC(C)C)CC(C)C)CC(=O)N)C)C(O)C)C)C)N
Isomeric SMILES CC(C)C[C@H](NC(=O)[C@@H]1CCCN1C(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](C)NC(=O)[C@@H](NC(=O)[C@H](C)NC(=O)CNC(=O)[C@H](C)NC(=O)[C@@H](N)CO)[C@@H](C)O)C(=O)N[C@@H](CCCN=C(N)N)C(=O)N[C@@H](CO)C(=O)O
InChI InChI=1S/C48H84N16O17/c1-21(2)15-29(42(75)58-28(11-9-13-53-48(51)52)41(74)62-32(20-66)47(80)81)60-44(77)33-12-10-14-64(33)46(79)31(16-22(3)4)61-43(76)30(17-34(50)68)59-38(71)25(7)57-45(78)36(26(8)67)63-39(72)24(6)55-35(69)18-54-37(70)23(5)56-40(73)27(49)19-65/h21-33,36,65-67H,9-20,49H2,1-8H3,(H2,50,68)(H,54,70)(H,55,69)(H,56,73)(H,57,78)(H,58,75)(H,59,71)(H,60,77)(H,61,76)(H,62,74)(H,63,72)(H,80,81)(H4,51,52,53)/t23-,24-,25-,26+,27-,28-,29-,30-,31-,32-,33-,36-/m0/s1
InChI Key VKPILWKQJZPQOB-LBVMNVMQSA-N

Generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/)
Classification Click here for help
Compound class Endogenous peptide in human, mouse or rat
Synonyms Click here for help
neuropeptide RFRP-2
Gene/Precursor Click here for help
Gene symbol Gene name Species Precursor protein name Synonyms
NPVF neuropeptide VF precursor Human FMRFamide-related peptide precursor C7orf9, chromosome 7 open reading frame 9, RFamide-related peptide precursor, RFRP
Database Links Click here for help
Ensembl Gene ENSG00000105954 (Hs)
GtoPdb PubChem SID 178102032
Human Protein Atlas ENSG00000105954 (Hs)
PubChem CID 102162394
Search Google for chemical match using the InChIKey VKPILWKQJZPQOB-LBVMNVMQSA-N
Search Google for chemicals with the same backbone VKPILWKQJZPQOB
UniChem Compound Search for chemical match using the InChIKey VKPILWKQJZPQOB-LBVMNVMQSA-N
UniChem Connectivity Search for chemical match using the InChIKey VKPILWKQJZPQOB-LBVMNVMQSA-N
UniProtKB Q9HCQ7 (Hs)