H4 antagonist 48   Click here for help

GtoPdb Ligand ID: 9879

Immunopharmacology Ligand
Compound class: Synthetic organic
Comment: Compound 48 is an orally active, selective histamine H4 receptor antagonist that was developed as a potential therapy for the pruritis and inflammation associated with atopic dermatitis [4].
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Ligand Activity Visualisation Charts

These are box plot that provide a unique visualisation, summarising all the activity data for a ligand taken from ChEMBL and GtoPdb across multiple targets and species. Click on a plot to see the median, interquartile range, low and high data points. A value of zero indicates that no data are available. A separate chart is created for each target, and where possible the algorithm tries to merge ChEMBL and GtoPdb targets by matching them on name and UniProt accession, for each available species. However, please note that inconsistency in naming of targets may lead to data for the same target being reported across multiple charts.

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2D Structure
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2D Structure

An image of the ligand's 2D structure. For small molecules with SMILES these are drawn using the NCI/CADD Chemical Identifier Resolver. Click on the image to access the chemical structure search tool with the ligand pre-loaded in the structure editor. For other types of ligands, e.g. longer nucleotides and peptides, a manually drawn representation of the molecule may be provided.

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Physico-chemical Properties
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Physico-chemical Properties

Calculated molecular properties are available for small molecules and natural products (not peptides). Properties were generated using the CDK toolkit. All properties were selected to enable the prediction of the Lipinski Rule-of-Five profile or ‘druglikeness’ for each ligand. For more info on each category see the help pages.

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Hydrogen bond acceptors 7
Hydrogen bond donors 1
Rotatable bonds 2
Topological polar surface area 84.13
Molecular weight 334.03
XLogP 2
No. Lipinski's rules broken 0
SMILES / InChI / InChIKey
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SMILES / InChI / InChIKey

SMILES (Simplified Molecular Input Line Entry Specification) A specification for unambiguously describing the structure of chemical molecules using short ASCII strings. Canonical SMILES specify a unique representation of the 2D structure without chiral or isotopic specifications. Isomeric SMILES include chiral specification and isotopes.

Standard InChI (IUPAC International Chemical Identifier) and InChIKey InChI is a non-proprietary, standard, textual identifier for chemical substances designed to facilitate linking of information and database searching. An InChIKey is a simplified version of a full InChI, designed for easier web searching.

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Canonical SMILES CNC1CN(C1)c1nc2ncc(cc2n2c1nnn2)Br
Isomeric SMILES CNC1CN(C1)c1nc2ncc(cc2n2c1nnn2)Br
InChI InChI=1S/C11H11BrN8/c1-13-7-4-19(5-7)10-11-16-17-18-20(11)8-2-6(12)3-14-9(8)15-10/h2-3,7,13H,4-5H2,1H3
InChI Key ICGICUHMULRYIQ-UHFFFAOYSA-N
Bioactivity Comments
H4 antagonist 48 exhibits no appreciable binding to the H1, H2 or H3 receptors or to a range of other protein targets including receptors, ion channels, and transporters (IC50s all >10 μM) [4].
Selectivity at GPCRs
Key to terms and symbols Click column headers to sort
Target Sp. Type Action Value Parameter Concentration range (M) Reference
H4 receptor Primary target of this compound Hs Antagonist Antagonist 7.6 pIC50 - 4
⤷ pIC50 7.6 (IC50 2.7x10-8 M) [4]
Description: Radioligand competitive binding assay using [3H]Histamine as tracer, and membrane preparations from CHO-K1 cells expressing human H4 receptor.
H4 receptor Mm Antagonist Antagonist 6.5 pIC50 - 4
⤷ pIC50 6.5 (IC50 2.9x10-7 M) [4]
Description: Radioligand competitive binding assay using [3H]Histamine as tracer, and membrane preparations from CHO-K1 cells expressing mouse H4 receptor.