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serine palmitoyltransferase long chain base subunit 1

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Target not currently curated in GtoImmuPdb

Target id: 2509

Nomenclature: serine palmitoyltransferase long chain base subunit 1

Abbreviated Name: SPT1

Family: Serine palmitoyltransferase

Gene and Protein Information Click here for help
Species TM AA Chromosomal Location Gene Symbol Gene Name Reference
Human 1 473 9q22.31 SPTLC1 serine palmitoyltransferase long chain base subunit 1
Mouse 1 473 13 B1 Sptlc1 serine palmitoyltransferase, long chain base subunit 1
Rat 1 473 17p14 Sptlc1 serine palmitoyltransferase, long chain base subunit 1
Previous and Unofficial Names Click here for help
hereditary sensory neuropathy, type 1 | HSN1 | LCB1 | Serine-palmitoyl-CoA transferase 1 | SPTI | serine palmitoyltransferase, long chain base subunit 1 | serine palmitoyltransferase
Database Links Click here for help
Alphafold
BRENDA
CATH/Gene3D
ChEMBL Target
Ensembl Gene
Entrez Gene
Human Protein Atlas
KEGG Enzyme
KEGG Gene
OMIM
Pharos
RefSeq Nucleotide
RefSeq Protein
UniProtKB
Wikipedia
Enzyme Reaction Click here for help
EC Number: 2.3.1.50 L-serine + palmitoyl-CoA -> 3-ketosphinganine + coenzyme A + CO2
Cofactors Click here for help
Cofactor Species Comments Reference
pyridoxal 5-phosphate Human

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Inhibitors
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Ligand Sp. Action Value Parameter Reference
myriocin Small molecule or natural product Ligand has a PDB structure Mm Inhibition 9.6 pKi 1
pKi 9.6 (Ki 2.8x10-10 M) [1]
Clinically-Relevant Mutations and Pathophysiology Click here for help
Disease:  Neuropathy, hereditary sensory and autonomic, type IA; HSAN1A
Synonyms: Hereditary sensory and autonomic neuropathy [Disease Ontology: DOID:11533]
Hereditary sensory and autonomic neuropathy type 1 [Orphanet: ORPHA36386]
Disease Ontology: DOID:11533
OMIM: 162400
Orphanet: ORPHA36386

References

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1. Miyake Y, Kozutsumi Y, Nakamura S, Fujita T, Kawasaki T. (1995) Serine palmitoyltransferase is the primary target of a sphingosine-like immunosuppressant, ISP-1/myriocin. Biochem Biophys Res Commun, 211 (2): 396-403. [PMID:7794249]

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