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cyclin dependent kinase 13

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Target not currently curated in GtoImmuPdb

Target id: 1966

Nomenclature: cyclin dependent kinase 13

Abbreviated Name: CDK13

Family: CRK7 subfamily

Contents:

Gene and Protein Information Click here for help
Species TM AA Chromosomal Location Gene Symbol Gene Name Reference
Human - 1512 7p14.1 CDK13 cyclin dependent kinase 13
Mouse - 1511 13 A2 Cdk13 cyclin dependent kinase 13
Rat - 1511 17 q12.1 Cdk13 cyclin-dependent kinase 13
Previous and Unofficial Names Click here for help
CDC2L | CDC2L5 | CDC2-related protein kinase 5 | cell division cycle 2-like 5 | cell division protein kinase 13
Database Links Click here for help
Alphafold Q14004 (Hs), Q69ZA1 (Mm)
BRENDA 2.7.11.22, 2.7.11.23
ChEMBL Target CHEMBL1795192 (Hs)
Ensembl Gene ENSG00000065883 (Hs), ENSMUSG00000041297 (Mm), ENSRNOG00000013620 (Rn)
Entrez Gene 8621 (Hs), 69562 (Mm), 306998 (Rn)
Human Protein Atlas ENSG00000065883 (Hs)
KEGG Enzyme 2.7.11.22, 2.7.11.23
KEGG Gene hsa:8621 (Hs), mmu:69562 (Mm), rno:306998 (Rn)
OMIM 603309 (Hs)
Pharos Q14004 (Hs)
RefSeq Nucleotide NM_003718 (Hs), NM_027118 (Mm), NM_001271295 (Rn)
RefSeq Protein NP_003709 (Hs), NP_001074527 (Mm), NP_001258224 (Rn)
UniProtKB Q14004 (Hs), Q69ZA1 (Mm)
Wikipedia CDK13 (Hs)
Enzyme Reaction Click here for help
EC Number: 2.7.11.22
EC Number: 2.7.11.23

Download all structure-activity data for this target as a CSV file go icon to follow link

Inhibitors
Key to terms and symbols View all chemical structures Click column headers to sort
Ligand Sp. Action Value Parameter Reference
CDK12 inhibitor 2 Small molecule or natural product Primary target of this compound Click here for species-specific activity table Hs Inhibition 8.0 pIC50 2
⤷ pIC50 8.0 (IC50 1x10-8 M) [2]
DiscoveRx KINOMEscan® screen Click here for help
A screen of 72 inhibitors against 456 human kinases. Quantitative data were derived using DiscoveRx KINOMEscan® platform.
http://www.discoverx.com/services/drug-discovery-development-services/kinase-profiling/kinomescan
Reference: 1,3
Key to terms and symbols Click column headers to sort
Target used in screen: CDC2L5
Ligand Sp. Type Action Value Parameter
AST-487 Small molecule or natural product Hs Inhibitor Inhibition 9.0 pKd
AT-7519 Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 8.5 pKd
BMS-387032 Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 7.6 pKd
linifanib Small molecule or natural product Hs Inhibitor Inhibition 7.4 pKd
staurosporine Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 7.2 pKd
R547 Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 7.0 pKd
foretinib Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 6.7 pKd
alvocidib Small molecule or natural product Ligand has a PDB structure Hs Inhibitor Inhibition 6.4 pKd
BMS-345541 Small molecule or natural product Immunopharmacology Ligand Hs Inhibitor Inhibition 6.1 pKd
lestaurtinib Small molecule or natural product Ligand has a PDB structure Immunopharmacology Ligand Hs Inhibitor Inhibition 6.0 pKd
Displaying the top 10 most potent ligands  View all ligands in screen »
Immuno Process Associations
Immuno Process:  Inflammation
Immuno Process:  Immune system development
Immuno Process:  Cellular signalling

References

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1. Davis MI, Hunt JP, Herrgard S, Ciceri P, Wodicka LM, Pallares G, Hocker M, Treiber DK, Zarrinkar PP. (2011) Comprehensive analysis of kinase inhibitor selectivity. Nat Biotechnol, 29 (11): 1046-51. [PMID:22037378]

2. Ito M, Tanaka T, Toita A, Uchiyama N, Kokubo H, Morishita N, Klein MG, Zou H, Murakami M, Kondo M et al.. (2018) Discovery of 3-Benzyl-1-( trans-4-((5-cyanopyridin-2-yl)amino)cyclohexyl)-1-arylurea Derivatives as Novel and Selective Cyclin-Dependent Kinase 12 (CDK12) Inhibitors. J Med Chem, 61 (17): 7710-7728. [PMID:30067358]

3. Wodicka LM, Ciceri P, Davis MI, Hunt JP, Floyd M, Salerno S, Hua XH, Ford JM, Armstrong RC, Zarrinkar PP et al.. (2010) Activation state-dependent binding of small molecule kinase inhibitors: structural insights from biochemistry. Chem Biol, 17 (11): 1241-9. [PMID:21095574]

How to cite this page

CRK7 subfamily: cyclin dependent kinase 13. Last modified on 28/08/2018. Accessed on 11/10/2024. IUPHAR/BPS Guide to PHARMACOLOGY, https://www.guidetopharmacology.org/GRAC/ObjectDisplayForward?objectId=1966.