batoprotafib   Click here for help

GtoPdb Ligand ID: 12068

Synonyms: compound 1 [PMID: 32910655] | TNO-155 | TNO155
PDB Ligand
Compound class: Synthetic organic
Comment: TNO155 is an oral, allosteric inhibitor of SHP2 (a nonreceptor protein tyrosine phosphatase that's encoded by the PTPN11 gene) [1]. SHP2 is an oncoprotein in its own right, but its inhibition is also being exploited to combat tumours that are driven by hyperactivation in the RAS-RAF-ERK signalling pathway.
We matched TNO155's chemical structure to the INN 'batoprotafib' which was published in the WHO's proposed INN list 127 on 21 July 2022.
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Ligand Activity Visualisation Charts

These are box plot that provide a unique visualisation, summarising all the activity data for a ligand taken from ChEMBL and GtoPdb across multiple targets and species. Click on a plot to see the median, interquartile range, low and high data points. A value of zero indicates that no data are available. A separate chart is created for each target, and where possible the algorithm tries to merge ChEMBL and GtoPdb targets by matching them on name and UniProt accession, for each available species. However, please note that inconsistency in naming of targets may lead to data for the same target being reported across multiple charts.

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View interactive charts of activity data across species
2D Structure
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2D Structure

An image of the ligand's 2D structure. For small molecules with SMILES these are drawn using the NCI/CADD Chemical Identifier Resolver. Click on the image to access the chemical structure search tool with the ligand pre-loaded in the structure editor. For other types of ligands, e.g. longer nucleotides and peptides, a manually drawn representation of the molecule may be provided.

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Physico-chemical Properties
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Physico-chemical Properties

Calculated molecular properties are available for small molecules and natural products (not peptides). Properties were generated using the CDK toolkit. All properties were selected to enable the prediction of the Lipinski Rule-of-Five profile or ‘druglikeness’ for each ligand. For more info on each category see the help pages.

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Hydrogen bond acceptors 8
Hydrogen bond donors 3
Rotatable bonds 3
Topological polar surface area 154.5
Molecular weight 421.15
XLogP 2.08
No. Lipinski's rules broken 0
SMILES / InChI / InChIKey
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SMILES / InChI / InChIKey

SMILES (Simplified Molecular Input Line Entry Specification) A specification for unambiguously describing the structure of chemical molecules using short ASCII strings. Canonical SMILES specify a unique representation of the 2D structure without chiral or isotopic specifications. Isomeric SMILES include chiral specification and isotopes.

Standard InChI (IUPAC International Chemical Identifier) and InChIKey InChI is a non-proprietary, standard, textual identifier for chemical substances designed to facilitate linking of information and database searching. An InChIKey is a simplified version of a full InChI, designed for easier web searching.

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Canonical SMILES N[C@@H]1[C@H](C)OCC21CCN(CC2)c1cnc(c(n1)N)Sc1ccnc(c1Cl)N
Isomeric SMILES Nc1nc(N2CCC3(CO[C@@H](C)[C@H]3N)CC2)cnc1Sc1c(Cl)c(N)ncc1
InChI InChI=1S/C18H24ClN7OS/c1-10-14(20)18(9-27-10)3-6-26(7-4-18)12-8-24-17(16(22)25-12)28-11-2-5-23-15(21)13(11)19/h2,5,8,10,14H,3-4,6-7,9,20H2,1H3,(H2,21,23)(H2,22,25)/t10-,14+/m0/s1
InChI Key UCJZOKGUEJUNIO-IINYFYTJSA-N
Classification Click here for help
Compound class Synthetic organic
IUPAC Name Click here for help
(3S,4S)-8-[6-amino-5-(2-amino-3-chloropyridin-4-yl)sulfanylpyrazin-2-yl]-3-methyl-2-oxa-8-azaspiro[4.5]decan-4-amine
International Nonproprietary Names Click here for help
INN number INN
12347 batoprotafib
Synonyms Click here for help
compound 1 [PMID: 32910655] | TNO-155 | TNO155
Database Links Click here for help
BindingDB Ligand 50553783
CAS Registry No. 1801765-04-7 (source: PubChem)
ChEMBL Ligand CHEMBL4650521
GtoPdb PubChem SID 472319190
PubChem CID 118238370
RCSB PDB Ligand VKS, VKS
Search Google for chemical match using the InChIKey UCJZOKGUEJUNIO-IINYFYTJSA-N
Search Google for chemicals with the same backbone UCJZOKGUEJUNIO
Search PubMed clinical trials batoprotafib
Search PubMed titles batoprotafib
Search PubMed titles/abstracts batoprotafib
UniChem Compound Search for chemical match using the InChIKey UCJZOKGUEJUNIO-IINYFYTJSA-N
UniChem Connectivity Search for chemical match using the InChIKey UCJZOKGUEJUNIO-IINYFYTJSA-N