dTRIM24   Click here for help

GtoPdb Ligand ID: 10536

Compound class: Synthetic organic
Comment: dTRIM24 is a Von Hippel-Lindau (VHL)-engaging degrader of the chromatin modifying enzyme TRIM24 [1]. It is a hybrid molecule of a TRIM24-engaging ligand (derived from ACS-9571) and a VHL-engaging ligand (VL-269). dTRIM24 more effectively displaces TRIM24 from chromatin compared to the parent TRIM24 bromodomain binding ligand IACS-9571.
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2D Structure
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Physico-chemical Properties
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Hydrogen bond acceptors 16
Hydrogen bond donors 5
Rotatable bonds 31
Topological polar surface area 296.6
Molecular weight 1112.43
XLogP 3.67
No. Lipinski's rules broken 2
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Canonical SMILES CCCOc1cccc(c1)Oc1cc2n(C)c(=O)n(c2cc1NS(=O)(=O)c1cccc(c1)C(=O)NCCOCCOCCOCC(=O)NC(C(C)(C)C)C(=O)N1CC(CC1C(=O)NCc1ccc(cc1)c1scnc1C)O)C
Isomeric SMILES CCCOc1cccc(c1)Oc1cc2n(C)c(=O)n(c2cc1NS(=O)(=O)c1cccc(c1)C(=O)NCCOCCOCCOCC(=O)N[C@@H](C(C)(C)C)C(=O)N1C[C@@H](C[C@H]1C(=O)NCc1ccc(cc1)c1scnc1C)O)C
InChI InChI=1S/C55H68N8O13S2/c1-8-20-75-40-12-10-13-41(28-40)76-47-30-45-44(61(6)54(69)62(45)7)29-43(47)60-78(70,71)42-14-9-11-38(26-42)51(66)56-19-21-72-22-23-73-24-25-74-33-48(65)59-50(55(3,4)5)53(68)63-32-39(64)27-46(63)52(67)57-31-36-15-17-37(18-16-36)49-35(2)58-34-77-49/h9-18,26,28-30,34,39,46,50,60,64H,8,19-25,27,31-33H2,1-7H3,(H,56,66)(H,57,67)(H,59,65)/t39-,46+,50-/m1/s1
Bioactivity Comments
dTRIM24 was selective for the TRIM24 bromodomain in a screening panel of 32 human bromodomains [1].
Selectivity at enzymes
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Target Sp. Type Action Value Parameter Concentration range (M) Reference
tripartite motif containing 24 Hs None Binding 6.5 pIC50 - 1
pIC50 6.5 (IC50 3.377x10-7 M) [1]
Description: Active binding to the TRIM24 bromodomain in TRIM24 ligand-displacement (AlphaScreen) assay.