lysophosphatidylcholine   Click here for help

GtoPdb Ligand ID: 2508

Abbreviated name: LPC
Comment: The structure shown here is a representative example of the lysophosphatidylcholine class of compounds. The R group terminal linked to the ester (shown here as a methyl group) is a fatty acid chain of varying length. For examples of lysophospatidylcholine compounds with specified chain lengths see oleoyl-lysophosphatidylcholine and 1-palmitoyl-lysophosphatidylcholine.
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2D Structure
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Physico-chemical Properties
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Hydrogen bond acceptors 7
Hydrogen bond donors 1
Rotatable bonds 10
Topological polar surface area 114.93
Molecular weight 299.11
XLogP -2.19
No. Lipinski's rules broken 0
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Canonical SMILES OC(COP(=O)(OCC[N+](C)(C)C)[O-])COC(=O)C
Isomeric SMILES O[C@@H](COP(=O)(OCC[N+](C)(C)C)[O-])COC(=O)C
InChI InChI=1S/C10H22NO7P/c1-9(12)16-7-10(13)8-18-19(14,15)17-6-5-11(2,3)4/h10,13H,5-8H2,1-4H3/t10-/m1/s1
Selectivity at ion channels
Key to terms and symbols Click column headers to sort
Target Sp. Type Action Value Parameter Concentration range (M) Reference
TRPV2 Mm Activator Activation - - 1x10-6 6-7
Conc range: 1x10-6 M [6-7]
ASIC3 Ligand is endogenous in the given species Hs Activator Partial agonist 5.4 pEC50 - 5
pEC50 5.4 (EC50 3.981x10-6 M) [5]
TRPC5 Ligand is endogenous in the given species Hs Activator - - - -
TRPC6 Ligand is endogenous in the given species Hs Activator - - - -
K2P10.1 Hs Activator - - - - 4
Targets where the ligand is described in the comment field
Target Comment
Ligand mentioned in the following text fields