[3H]GABA   Click here for help

GtoPdb Ligand ID: 5410

PDB Ligand  Ligand is labelled  Ligand is radioactive
Compound class: Synthetic organic

[3H]GABA is commercially available from our sponsors

2D Structure
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2D Structure

An image of the ligand's 2D structure. For small molecules with SMILES these are drawn using the NCI/CADD Chemical Identifier Resolver. Click on the image to access the chemical structure search tool with the ligand pre-loaded in the structure editor. For other types of ligands, e.g. longer nucleotides and peptides, a manually drawn representation of the molecule may be provided.

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Physico-chemical Properties
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Physico-chemical Properties

Calculated molecular properties are available for small molecules and natural products (not peptides). Properties were generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/). All properties were selected to enable the prediction of the Lipinski Rule-of-Five profile or ‘druglikeness’ for each ligand. For more info on each category see the help pages.

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Hydrogen bond acceptors 3
Hydrogen bond donors 2
Rotatable bonds 3
Topological polar surface area 63.32
Molecular weight 103.06
XLogP -0.67
No. Lipinski's rules broken 0

Generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/)
SMILES / InChI / InChIKey
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SMILES / InChI / InChIKey

SMILES (Simplified Molecular Input Line Entry Specification) A specification for unambiguously describing the structure of chemical molecules using short ASCII strings. Canonical SMILES specify a unique representation of the 2D structure without chiral or isotopic specifications. Isomeric SMILES include chiral specification and isotopes.

Standard InChI (IUPAC International Chemical Identifier) and InChIKey InChI is a non-proprietary, standard, textual identifier for chemical substances designed to facilitate linking of information and database searching. An InChIKey is a simplified version of a full InChI, designed for easier web searching.

Generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/)

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Canonical SMILES NCCCC(=O)O
Isomeric SMILES NCCCC(=O)O
InChI InChI=1S/C4H9NO2/c5-3-1-2-4(6)7/h1-3,5H2,(H,6,7)
InChI Key BTCSSZJGUNDROE-UHFFFAOYSA-N

Generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/)
Classification Click here for help
Compound class Synthetic organic
IUPAC Name Click here for help
4-aminobutanoic acid
Database Links Click here for help
Specialist databases
GPCRdb Ligand [3H]GABA
Other databases
ChEMBL Ligand CHEMBL96
DrugCentral Ligand 1262
GtoPdb PubChem SID 178102063
LIPID MAPS LMFA01100039
PubChem CID 119
RCSB PDB Ligand ABU
Search Google for chemical match using the InChIKey BTCSSZJGUNDROE-UHFFFAOYSA-N
Search Google for chemicals with the same backbone BTCSSZJGUNDROE
UniChem Compound Search for chemical match using the InChIKey BTCSSZJGUNDROE-UHFFFAOYSA-N
UniChem Connectivity Search for chemical match using the InChIKey BTCSSZJGUNDROE-UHFFFAOYSA-N

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MedChemExpress
γ-Aminobutyric acid (links to external site)
Cat. No. HY-N0067