(R)-PFI-2   Click here for help

GtoPdb Ligand ID: 8235

PDB Ligand
Compound class: Synthetic organic
Comment: (R)-PFI-2 is a first-in-class, potent, selective, and cell-permeable inhibitor of the methyltransferase activity of human SETD7 [1]. The S-enantiomer is 500-fold less potent. (R)-PFI-2 can be used as a chemical probe to resolve the diverse roles of SETD7 in cellular function, and may provide insight for the potential of methyltransferases as valid drug targets. This is a compound from the Structural Genomics Consortium's (SGC) Epigenetics Probes Collection.
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2D Structure
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Physico-chemical Properties
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Hydrogen bond acceptors 6
Hydrogen bond donors 2
Rotatable bonds 8
Topological polar surface area 86.89
Molecular weight 499.16
XLogP 3.11
No. Lipinski's rules broken 0
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Canonical SMILES O=C(C(NS(=O)(=O)c1cc(F)c2c(c1)CCNC2)Cc1cccc(c1)C(F)(F)F)N1CCCC1
Isomeric SMILES O=C([C@H](NS(=O)(=O)c1cc(F)c2c(c1)CCNC2)Cc1cccc(c1)C(F)(F)F)N1CCCC1
InChI InChI=1S/C23H25F4N3O3S/c24-20-13-18(12-16-6-7-28-14-19(16)20)34(32,33)29-21(22(31)30-8-1-2-9-30)11-15-4-3-5-17(10-15)23(25,26)27/h3-5,10,12-13,21,28-29H,1-2,6-9,11,14H2/t21-/m1/s1
Classification Click here for help
Compound class Synthetic organic
IUPAC Name Click here for help
Database Links Click here for help
CAS Registry No. 1627676-59-8
GtoPdb PubChem SID 249565915
PubChem CID 71300326
RCSB PDB Ligand 1L8
Search Google for chemical match using the InChIKey JCKGSPAAPQRPBW-OAQYLSRUSA-N
Search Google for chemicals with the same backbone JCKGSPAAPQRPBW
Search UniChem for chemical match using the InChIKey JCKGSPAAPQRPBW-OAQYLSRUSA-N
Search UniChem for chemicals with the same backbone JCKGSPAAPQRPBW
SynPHARM 81848 (in complex with SET domain containing lysine methyltransferase 7)