ARN-3236   Click here for help

GtoPdb Ligand ID: 9581

Synonyms: example 86 [WO2014093383]
Compound class: Synthetic organic
Comment: ARN-3236 is an orally active, ATP-competitive inhibitor of salt-inducible kinases (SIKs) [3]. It is one of the chemical structures claimed in patent WO2014093383, in which it is referred to as Example 86 or compound 114 [2].
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Ligand Activity Visualisation Charts

These are box plot that provide a unique visualisation, summarising all the activity data for a ligand taken from ChEMBL and GtoPdb across multiple targets and species. Click on a plot to see the median, interquartile range, low and high data points. A value of zero indicates that no data are available. A separate chart is created for each target, and where possible the algorithm tries to merge ChEMBL and GtoPdb targets by matching them on name and UniProt accession, for each available species. However, please note that inconsistency in naming of targets may lead to data for the same target being reported across multiple charts.

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View interactive charts of activity data across species
2D Structure
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2D Structure

An image of the ligand's 2D structure. For small molecules with SMILES these are drawn using the NCI/CADD Chemical Identifier Resolver. Click on the image to access the chemical structure search tool with the ligand pre-loaded in the structure editor. For other types of ligands, e.g. longer nucleotides and peptides, a manually drawn representation of the molecule may be provided.

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Physico-chemical Properties
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Physico-chemical Properties

Calculated molecular properties are available for small molecules and natural products (not peptides). Properties were generated using the CDK toolkit. All properties were selected to enable the prediction of the Lipinski Rule-of-Five profile or ‘druglikeness’ for each ligand. For more info on each category see the help pages.

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Hydrogen bond acceptors 1
Hydrogen bond donors 1
Rotatable bonds 4
Topological polar surface area 75.38
Molecular weight 336.09
XLogP 4.63
No. Lipinski's rules broken 0
SMILES / InChI / InChIKey
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SMILES / InChI / InChIKey

SMILES (Simplified Molecular Input Line Entry Specification) A specification for unambiguously describing the structure of chemical molecules using short ASCII strings. Canonical SMILES specify a unique representation of the 2D structure without chiral or isotopic specifications. Isomeric SMILES include chiral specification and isotopes.

Standard InChI (IUPAC International Chemical Identifier) and InChIKey InChI is a non-proprietary, standard, textual identifier for chemical substances designed to facilitate linking of information and database searching. An InChIKey is a simplified version of a full InChI, designed for easier web searching.

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Canonical SMILES COc1cc(OC)ccc1c1c[nH]c2c1c(ccn2)c1cscc1
Isomeric SMILES COc1cc(OC)ccc1c1c[nH]c2c1c(ccn2)c1cscc1
InChI InChI=1S/C19H16N2O2S/c1-22-13-3-4-15(17(9-13)23-2)16-10-21-19-18(16)14(5-7-20-19)12-6-8-24-11-12/h3-11H,1-2H3,(H,20,21)
InChI Key WEHOIIGXTMKVRG-UHFFFAOYSA-N
Bioactivity Comments
ARN-3236 is effective in vitro and in vivo in sensitizing cancer cells to the chemotherapeutic paclitaxel [3]. Kinase profile screening identified off-targets which include LCK, NUAK2, SRPK1 and VEGFR2, which are all inhibited by >80% in the presence of 500nM ARN-3236 [1].
Selectivity at enzymes
Key to terms and symbols Click column headers to sort
Target Sp. Type Action Value Parameter Concentration range (M) Reference
salt inducible kinase 2 Hs Inhibitor Inhibition >9.0 pIC50 - 1
⤷ pIC50 >9.0 (IC50 <1x10-9 M) [1]
Description: In an in vitro enzymatic assay.
SIK family kinase 3 Hs Inhibitor Inhibition 8.2 pIC50 - 1
⤷ pIC50 8.2 (IC50 6.6x10-9 M) [1]
Description: In an in vitro enzymatic assay.
salt inducible kinase 1 Hs Inhibitor Inhibition 7.7 pIC50 - 1
⤷ pIC50 7.7 (IC50 2.16x10-8 M) [1]
Description: In an in vitro enzymatic assay.